Quick Biology Bioinformatics Analysis Service
Overview
Professional bioinformatics support has become an essential part of any NGS based Genomics study. Quick Biology’s bioinformatics service is designed to assist researchers in areas of difficulties, such as Bio-IT, statistics, and data mining. Service is divided into Standard and Advanced service, and customized service plus functional validation of NGS results using our quick validation services are also available.
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Unique bioinformatics services from Quick Biology:
Standard Service:
b. Alignment to a reference with mapping statistics
d. Differentially Expressed Gene
Advanced service:
i. Alternative pre-mRNA splicing
m. Fusion genes/transcript detection
a. Germline variants, compared to reference genome
b. Somatic mutations if Tumor-Normal pair (SNVs, InDel, CNV)
c. Pathway Analysis of Variants
d. Interaction Network Analysis of Variants
a. Germline variants, compared to reference genome
b. Somatic mutations if Tumor-Normal pair
c. Pathway Analysis of Variants
d. Interaction Network Analysis of Variants
4.ChIP Sequencing
a. Raw data QC and clean up
b. Alignment to a reference with mapping statistics
c. Peaking calling with or without control samples
d. Gene assignment and peak annotation
e. Visualization
f. Final project report with analysis methods, publication-ready graphics, and references
5.Combinatorial/Integrative Genomics and customized service
-Combinatorial
a. Combine with Cancer Genome Atlas: TCGA)
b. Combine with data in GEO (Gene Expression Omnibus)
c. Combine with data in ArrayExpress
d. Combine with data in Cosmic
e. Combine with data in GDSC
f. Combine with data in CCLE
-Integrative Genomics and customized service
g. Sequential analysis combining several distinct omics data from the same set of samples.
h. Gene-set analysis to discover novel or using known groups of related genes/molecules.
i. Pairwise correlation analysis to infer molecular network interactions.
j. Network analysis using molecular network interactions to identify active or aberrant subgraphs.
k. Bayesian analysis to guide making correct assumptions to integrate multiple omics data.
l. Integrative analyses of many tumor types for the clinical application.
Turnaround time
About 1-3 weeks based on specific project.